Circos

Get Circos

Download the last version of CIRCOS.

Configuration

Requierements

You will need to install these CPAN packages:

sudo cpan Config::General
sudo cpan Math::VecStat
sudo cpan Math::Round
sudo cpan Set::IntSpan
sudo cpan Statistics::Descriptive
sudo cpan Graphics::ColorObject
sudo cpan GD::Polyline
sudo cpan GD::Image

Configuration file

You can use these CIRCOS configuration files.

Generation of the Circos image

$ ./object_to_circos.py -i data/dic.pyobj -o data/ip.circos
$ cat ip.circos | ./bin/parse-table | ./bin/make-conf -dir data
$ ../../bin/circos -conf etc/circos.conf